"Well, what do you know?" Samantha Frost

Monday, October 25, 2010

posted under , , , by Unit for Criticism

[Kritik is pleased to publish the third in a series of posts by Samantha Frost, associate professor in Political Science and Gender and Women’s Studies. As the recipient of a Mellon New Directions Fellowship, Sam is enrolled in undergraduate courses in biology and neuroscience with the aim of enhancing her research on materialist accounts of perception, judgment, and subjectivity. Last spring and over the summer, she took the pre-requisite courses in organic chemistry, basic physiology, and molecular biology. This semester, she is taking a further 12 credits of courses in biochemistry, cell biology, and neuroscience.]

"WELL, WHAT DO YOU KNOW?"

Written by Samantha Frost (Political Science, GWS)

Imagine this scenario: I drop my kids off at school, I set off to the grocery store to pick up a few things before my day begins, and then I find myself pulling into the driveway of my home, sans groceries… because I did not actually go to the store.

Has this ever happened to you?

The semester is galloping along and everything I am learning is so extraordinarily fascinating that it is difficult to know what to select to talk about. So I decided to share a neuroscience insight (courtesy of Paul Gold) that stands out because it explains some of life’s peculiarities.

Neuroscientists who are interested in the processes of learning and memory study which parts of the brain are involved in different aspects of memory formation. To this end, they train rats to do tasks that are known to use specific parts of the brain, they inactivate said brain area or hyper-activate others, and then observe what the rats do when confronted with the learned task again.

In many cases, if a task-specific brain region is inactivated, the affected rat will no longer know how to do the associated task. In some cases, however, the rat will know how to do that task—or a different one—even better than before. Such results suggest that different areas of the brain have characteristic strategies for learning and that these different areas can function antagonistically, cooperatively, or weirdly in tandem. It is this kind of weird—cool, complex, but weird—interaction that I want to highlight today.


Enter the players: the hippocampus and the striatum.

The hippocampus is a part of the brain that tends to be most active when rats learn to run a maze by orienting themselves via environmental cues outside the confines of the maze. Its prototypical instruction is something like: always run in the direction of the corner near the poster, no matter which way the maze is rotated in the room. This is called place-learning.


In contrast, the striatum tends to be most active when rats learn to run a maze by remembering which ways they should turn at a particular junction. Here, the body is the reference point for coordination. The striatum says, figuratively speaking: always turn left, no matter which way the maze is rotated in the room. This is called response-learning.

It turns out that rats are predisposed to learn either one way or another: my sense (although I could be mistaken) is that it is a fairly even split among the experimental rat population. And yet, if the rats are trained at the same task over and over, eventually they all habitually adopt the response-strategy. In other words, turning left or right is what they come to know.

This is the interesting part: Once the rats have been trained to this level of habituation (i.e. always turn left), if the striatum is experimentally knocked out, it is not the case that the rats then do not know what to do. Rather, they exhibit the hippocampus’s strategy—or place-learning. In other words, the well-trained rats rely on environmental or spatial cues and do the equivalent of always heading towards the corner near the poster.

What this means is that even as one brain area and learning strategy predominates (always turn left), the other brain area is nevertheless learning (always head towards the poster). We could say that the rats know both of these things. Yet, given the pre-dominance of the striatum, what it knows is what the rats know to do, i.e., what they exhibit in their behavior when the orientation of the maze in the room is switched. When the striatum is deactivated, what the hippocampus knows becomes what the rats know to do.


So—and here we make a transition from rat brains to human brains—when we are engaged in a task, different areas or systems of our brains are learning different things about what the task demands. We think we are learning one thing but our brains are actually learning several different things. And what these several things are can become evident when we find ourselves in novel situations—will you do the equivalent of turning left? or of heading towards the poster? These things that we know can also become evident when the function of one of the brain areas in question is boosted, distracted, or somehow underpowered.

Back to my non-trip to the store. It wasn’t that I was distracted; I wasn’t forgetting something. In fact, I felt I was doing exactly what I was supposed to do. At that crucial traffic light on Prospect Avenue, at the determining intersection, it didn’t even occur to me to turn west onto Springfield to head toward the grocery store. I knew what I was doing. I simply took a right and drove home. It appears to have been something akin to a striatal move: At this intersection, always turn right!

But of course, even as this neuroscience stuff possibly answers the question of why I sometimes miss getting to the grocery store—or whatever errand is on the agenda—it raises yet another: What is my hippocampus doing when I find myself inadvertently “turning right” instead of going to the store? Clearly, turning right at that light is a habit—hence the likelihood of the striatum being dominant in that moment. But why was the striatum dominant at that moment?

Apparently, the balance between the different brain systems is regulated by brain areas known as modulators—I haven’t learned yet what enables modulators to shift the balance one way or another, but it is coming up soon. However, it is clear that modulators, as well as the different learning or memory systems themselves, are variously affected by the chemicals released into our brains in response to specific task demand, anxiety, stress, the food and alcohol that we consume, as well as the other things we (and our bodies) are doing.

There is a complex chemical flux between the outside and the inside of our bodies—and the various parts of the inside—that affects what among the many things we know we happen to know effectively. In this context, Descartes’ argument culminating in “cogito ergo sum” seems not mistaken, really, but rather a gross misrepresentation of what is at issue in our knowing what we know.

Not only are we not self-mastering, self-transparent subjects—an insight that is still sometimes difficult to grasp at the mundane level even as it makes sense theoretically. We are also not possessed of a brain that functions as a singular, internally unified entity—although one must acknowledge that coordination among the bits is such that we often do end up roughly succeeding, and sometimes spectacularly succeeding, in the tasks to which we set ourselves.

My point, however, is that we can know different and sometimes contradictory things about, say, a task. And when we know that we know one of those things, we may not be aware that we also know the other. In other words, our brains are internally plural, with systems that function in competition, cooperation, or concert without our awareness and depending upon our state of hunger, stress, inebriation, caffeination, or hormonal calibration. At any given moment, what we know, and what we know ourselves to know, is in some sense beyond our ken and control.

When I consider this, I am profoundly aware of myself as an organism.

And that’s unsettling.

*****
These are some of the materials we read in class related to this issue:

E. McNay and P. Gold. “Food for Thought: Fluctuations in Brain Extracellular Glucose Provide Insight Into the Mechanisms of Memory Modulation”. Behavioral and Cognitive Neuroscience Reviews. 1:4 (December 2002): 264-80

P. Gold. “Coordination of multiple memory systems”. Neurobiology of Learning and Memory. 82 (2004): 230–42

P. Gold. “Memory-Enhancing Drugs”. In H. Eichenbaum (Ed.), Memory Systems. Vol. [3] of Learning and Memory: A Comprehensive Reference, 4 vols., ed. J.Byrne (Oxford: Elsevier, 2008), pp.555-76.
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"Second Week of Classes" Samantha Frost

Saturday, September 11, 2010


[Kritik is pleased to publish the second in a series of posts by Samantha Frost, associate professor in Political Science and Gender and Women’s Studies. As the recipient of a Mellon New Directions Fellowship, Sam is enrolled in undergraduate courses in biology and neuroscience with the aim of enhancing her research on materialist accounts of perception, judgment, and subjectivity. Last spring and over the summer, she took the pre-requisite courses in organic chemistry, basic physiology, and molecular biology. This semester, she is taking a further 12 credits of courses in biochemistry, cell biology, and neuroscience.]

"SECOND WEEK OF CLASSES"

Written by Samantha Frost (Political Science, GWS)

This week, I am at a conference, the annual American Political Science Association meeting. I am missing my classes (anxiously), keeping up with my readings, trying to remember the various online quizzes and homework assignments that I must do. And of course, I am hanging out with my political theory colleagues from everywhere. And a number of these colleagues, in their astonishment if not disbelief that I am studying cellular biology, jokingly inquire if I aspire to be able to explain to them what life is. The. Big. Question. I know that they are joking, but even so, it makes me want to share my reflections upon mitochondria.

In the cells of animal and plant life, there are different subunits called organelles that perform functions related to the cell’s persistence and self-reproduction. There is a nucleus, which houses and produces all the genetic information of the cell—and of the organism of which it is a part. There are little factories that produce proteins and other chemicals that are useful and necessary. There are millions of pieces of protein scaffolding that give shape and flexibility to the cell and that also serve as tracks for the transport of the cell’s nutrients, products, and waste. And there are mitochondria, small subunits that produce the energy that the cell needs to do everything that it does.

What is interesting is that all the organelles except the mitochondria are produced according to the genetic information in the cell’s nucleus. By contrast, mitochondria have their own DNA.

The speculated reason for their having their own DNA, rather than being dependent upon the cell’s nucleoid DNA, is that way back when life first formed, there was a constitutive parasitic relation between the formation of a cell and a form of bacteria.

I will likely run roughshod over the beautiful details, but the story runs something like this. And, let me say, it is a story in which are centered the kinds of hydrophobic interactions I mentioned in my last post, i.e. in which molecules which are insoluble in water end up being bound together because of the entropic movement of water.

So, in the chemically rich primordial soup, a bunch of insoluble molecules bind together in such a way as to create a membrane—a membrane whose edges meet themselves so perfectly as to create a sphere and to constitute an inside separated from the outside. Because of the force of entropy, this ends up being a pretty stable formation. Voila: a simple cell. Over time, the concentration of chemicals on the inside and on the outside of the cell membrane differ, a difference that creates a chemical gradient. This chemical gradient provides the occasion for the movement or diffusion of different chemicals in and out of the cell.

The theory is that when the membrane enclosed, it enclosed around a form of bacteria which happened to be able to produce energy, i.e. break apart molecules to release the energy of the electrical bond that holds the molecules together. That electrical energy made the diffusion of chemicals in and out of the cell easier and more efficient, which of course made it easier for the bacteria to survive.

Eventually (think: long evolutionary history), the bacteria loses many of its bacterial features, its development emphasizing instead the ever more efficient production of energy: it becomes a mitochondria. And eventually (long evolutionary history), the chemicals inside the cell, interacting with the energy provided by the mitochondria, form into differentiated proteins and subcellular units that ever more efficiently sustain and reproduce the cell… that nourishes and sustains the mitochondria whose energy enables the cell to persist and reproduce itself.

There are number of things I find striking in this. One thing is that, if one conceptually inhabits the relation between the mitochondria and the cell—I mean, really inhabits it—it is as if one could say that all these fabulous forms of life we see about us are the amazing habitats encouraged, provoked, or grown by these incredibly highly evolved bacteria-mitochondria. Life as we know it could be the condition and beautifully refined product of a bacteria that luckily found itself within an environment set off from the soup. This is a bizarre kind of displacement or decentering—not of the human, because it is bigger than that, but of what we imagine to be the units or driving force of life.

A second thing, related, is that the special nature of the mitochondria is that it complicates our sense of the singularity of the cell. That is, what occasions the cellular life that we currently recognize as plant or animal life is this accidental but effective parasitic relationship between a cell and a mitochondria: neither could survive or develop without the other. The mitochondria is not of the cell—hence its distinctive DNA—and yet it could not be without the cell. Just as the cells could not survive, develop, and evolve without the mitochondria.

So, there is a constitutive heterogeneity in the very possibility life. A cell is neither one nor two: because of the mutual interdependence and development of the mitochondria and the cell, unitary terms (i.e., one cell, two cells, three cells) are not adequate to the task of thinking about cellular life.

It reminds me of those debates about the anomaly of the pregnant body: is it one? is it two? and how that anomalous status complicates the legal concepts we use to negotiate (or undermine) women’s rights. How might we re-imagine that debate if that heterogeneity is the basic form of life.

It also makes me wonder what might happen if such a model of heterogeneity were incorporated into efforts of theorists to imagine or figure the vitality or virtual liveliness of material, informational, and cultural systems or phenomena (for instance, Jane Bennett's fabulous new book, Vibrant Matter or Brian Massumi's book Parables of the Virtual). It may not be enough for a system to be distinct from its environment (albeit in porous interrelationship with it). Would one need to incorporate this parasitic moment?

I want to say, in response to the last thought, that in our current situation, perhaps the human is akin to the mitochondria. Which makes me think that, as I reread Bennett and Massumi, I also need to revisit Michel Serres’s book Parasite in which the parasitic relation is conceived as, in some sense, the fundamental form of relation.
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"First Week of Classes" Samantha Frost

Saturday, August 28, 2010

posted under , , , by Unit for Criticism

[This week Kritik is pleased to publish the first in a series of posts by Samantha Frost, associate professor in Political Science and Gender and Women’s Studies. As the recipient of a Mellon New Directions Fellowship, Sam is now enrolled in undergraduate coursework in biology and neuroscience with the aim of enhancing her research on materialist accounts of perception, judgment, and subjectivity. Last spring and over the summer, she took the pre-requisite courses in organic chemistry, basic physiology, and molecular biology. This semester, she is taking a further 12 credits of courses in biochemistry, cell biology, and neuroscience. Professor Frost’s ruminations on her return to undergraduate-level education in the sciences will also be published in hard copy in future issues of the IPRH Newsletter]

FIRST WEEK OF CLASSES”

Written by Samantha Frost (Political Science, GWS)


Well, I am almost done negotiating the registration process and have almost finished my first week of classes: a blither of finding classrooms in unfamiliar buildings and cramming myself into these terribly old desk/chair combos in massive lecture halls with hundreds upon hundreds of variously attentive and computing/texting undergraduates. It is going to be a busy semester but possibly not as hard as Spring semester was.

My first freakout: Biochemistry is going to be a killer. It is like organic chemistry, but more so: bigger molecules, more complex interactions. I am using my "Amino Buddy" app on my iphone to try to memorize the amino acids in all their various notations: the match game seems to work the best for me. So I sit on the floor while my kids are at Tae Kwon Do and work through flashcard games in order to be able to recognize by sight the chemical structure and symbols of the amino acids that make up proteins that make up our bodies....
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